Persona: Martínez Romo, Juan
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Martínez Romo
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Juan
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Publicación A keyphrase-based approach for interpretable ICD-10 code classification of Spanish medical reports(Elsevier, 2021) Fabregat Marcos, Hermenegildo; Duque Fernández, Andrés; Araujo Serna, M. Lourdes; Martínez Romo, JuanBackground and objectives: The 10th version of International Classification of Diseases (ICD-10) codification system has been widely adopted by the health systems of many countries, including Spain. However, manual code assignment of Electronic Health Records (EHR) is a complex and time-consuming task that requires a great amount of specialised human resources. Therefore, several machine learning approaches are being proposed to assist in the assignment task. In this work we present an alternative system for automatically recommending ICD-10 codes to be assigned to EHRs. Methods: Our proposal is based on characterising ICD-10 codes by a set of keyphrases that represent them. These keyphrases do not only include those that have literally appeared in some EHR with the considered ICD-10 codes assigned, but also others that have been obtained by a statistical process able to capture expressions that have led the annotators to assign the code. Results: The result is an information model that allows to efficiently recommend codes to a new EHR based on their textual content. We explore an approach that proves to be competitive with other state-of-the-art approaches and can be combined with them to optimise results. Conclusions: In addition to its effectiveness, the recommendations of this method are easily interpretable since the phrases in an EHR leading to recommend an ICD-10 code are known. Moreover, the keyphrases associated with each ICD-10 code can be a valuable additional source of information for other approaches, such as machine learning techniques.Publicación Deep learning approach for negation trigger and scope recognition(Sociedad Española para el Procesamiento del Lenguaje Natural, 2019) Fabregat Marcos, Hermenegildo; Araujo Serna, M. Lourdes; Martínez Romo, JuanLa detección automática de los distintos elementos de la negación es un frecuente tema de estudio debido a su alto impacto en diversas tareas de procesamiento de lenguaje natural. Este articulo presenta un sistema basado en deep learning y de arquitectura no dependiente del idioma para la detección automática tanto de disparadores como del alcance de la negación para inglés y español. El sistema presentado obtiene para ingles resultados comparables a los obtenidos en recientes trabajos por sistemas más complejos. Para español destacan los resultados obtenidos en la detección de claves de negación. Por último, los resultados para el reconocimiento del alcance de la negación, son similares a los obtenidos en inglés.Publicación Deep learning approach for negation trigger and scope recognition(Sociedad Española para el Procesamiento del Lenguaje Natural, 2019) Fabregat Marcos, Hermenegildo; Araujo Serna, M. Lourdes; Martínez Romo, JuanLa detección automática de los distintos elementos de la negación es un frecuente tema de estudio debido a su alto impacto en diversas tareas de procesamiento de lenguaje natural. Este articulo presenta un sistema basado en deep learning y de arquitectura no dependiente del idioma para la detección automática tanto de disparadores como del alcance de la negación para inglés y español. El sistema presentado obtiene para ingles resultados comparables a los obtenidos en recientes trabajos por sistemas más complejos. Para español destacan los resultados obtenidos en la detección de claves de negación. Por último, los resultados para el reconocimiento del alcance de la negación, son similares a los obtenidos en inglés.Publicación A keyphrase-based approach for interpretable ICD-10 code classification of Spanish medical reports(Elsevier, 2021) Fabregat Marcos, Hermenegildo; Duque Fernández, Andrés; Araujo Serna, M. Lourdes; Martínez Romo, JuanBackground and objectives: The 10th version of International Classification of Diseases (ICD-10) codification system has been widely adopted by the health systems of many countries, including Spain. However, manual code assignment of Electronic Health Records (EHR) is a complex and time-consuming task that requires a great amount of specialised human resources. Therefore, several machine learning approaches are being proposed to assist in the assignment task. In this work we present an alternative system for automatically recommending ICD-10 codes to be assigned to EHRs. Methods: Our proposal is based on characterising ICD-10 codes by a set of keyphrases that represent them. These keyphrases do not only include those that have literally appeared in some EHR with the considered ICD-10 codes assigned, but also others that have been obtained by a statistical process able to capture expressions that have led the annotators to assign the code. Results: The result is an information model that allows to efficiently recommend codes to a new EHR based on their textual content. We explore an approach that proves to be competitive with other state-of-the-art approaches and can be combined with them to optimise results. Conclusions: In addition to its effectiveness, the recommendations of this method are easily interpretable since the phrases in an EHR leading to recommend an ICD-10 code are known. Moreover, the keyphrases associated with each ICD-10 code can be a valuable additional source of information for other approaches, such as machine learning techniques.